The museum is housed in the katholikon of the Venetian monastery of St. Francis. During the period of the Turkish occupation it was the Muslim mosque of Yussuf Pasha, while in modern times it was used as a cinema or a storehouse for military equipment. Since 1963 it has been functioning as the Archaeological Museum of the city. Apart from the permanent exhibition, the museum houses temporary exhibitions in the frame of certain local events
25 Chalidon Str., tel. +30821 90334
It contains impressive finds from the excavations of the ancient city of Kydonia, from Idramia, Aptera, Polyrinia, Kissamos, Elyros, Irtakina, Syia, Lissos, Chania, Axos, and Lappa.

Chania lighthouse, the jewel of the city, is one of the oldest light houses, not only in Greece and the Mediterranean, but also in the world. The lighthouse (Faros GR: Φάρος) is a major attraction in the old port of Chania especially at night when it's lit up. The tower is 21m high and is built on a stone base, located at the end of the old harbour's pier opposite to the fortress of "Firkas". Visitors are not allowed to enter the tower. Chania lighthouse was first constructed by the Venetians around 1595 - 1601, and it took its final form, in the shape of a minaret, during the Egyptian Period (1831 - 1841) in around 1839. After the latest restoration, completed in 2006, it was given the formation of the Venetian period. The minaret look is still evident however.

The Market, impressive for its size and shape, is built in the shape of a cross with 76 shops grouped according to their wares in the four arms of the cross. The south façade is particularly well constructed out of chiseled limestone, in the architectural style of the local tradition, developed during the Venetian period. Its construction was completed in 1913 and the formal opening was made by Eleftherios Venizelos on 4th December 1913 as part of the celebrations for the Unification of Crete to Greece.

The wealth of archaeological material yielded by excavations conducted over many years by the 13th Ephorate of Byzantine Antiquities in the county of Chania, and also by retrieval of material and donations, forms a Collection that records, with great clarity, the history of the westernmost county in Crete from Early Christian times to the period of Turkish rule. Representative examples of this Collection are displayed in the church of San Salvatore.

The Franciscan monastery of San Salvatore, that houses the Byzantine and Post-Byzantine Collection of Chania, was built on the west side of the fortress of Chania, in three phases from the 15th century until the late Venetian period (middle of 17th century). The extensive restoration of the church made it possible to identify more clearly the various building phases of the monument, unify the space, and display its austere, uncluttered architectural features to good effect. The original church, which probably dates from the 15th century, was the small domed section on the east side.

The fortress on the northwest side of the port was constructed to protect the entrance of the port and maintains its Turkish name "Firká" (Firka=barracks). A chain from "Firka" to the lighthouse blocked the entrance to the port in case of intrusion. The fortress was the headquarters of the Army Commander of the city.

A two storey house, located at the old port of Hania, with a total area of 840 m2. The exhibition includes about 2,500 exhibits, such as models of ships, different kinds of naval instruments and devices, paintings, heirlooms, gleanings from the sea bottom, shells, photographs etc., which are divided in 13 units, covering chronologically all the periods.

The south complex was completed in 1599, with the construction of 17 Neoria. Today only 7 survive out of the 17. In their original form they were open on the side of the sea. The ceilings are arched, and they are connected with arched openings of the same thickness as the walls.